CDS

Accession Number TCMCG042C60535
gbkey CDS
Protein Id XP_016492671.1
Location join(25246..27301,27503..28319,28455..28745,29251..29458)
Gene LOC107812152
GeneID 107812152
Organism Nicotiana tabacum

Protein

Length 1123aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016637185.1
Definition PREDICTED: phytochrome A1 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCATCTTCAAGACCAAGCCAATCTTCCACCACTTCAGCAAGATCAAAGCATAGTGCTAGGATCATTGCACAGACCACTATAGATGCAAAGCTTCATGCAGATTTCGAGGAGTCGGGTGATTCCTTTGACTATTCAAGCTCAGTGAGGGTAACAAGTGTAGCTGGGGATGAGCGAAAGCCCAAGTCAGACAGAGTAACTACCGCTTACCTCAATCAGATCCAAAAGGGCAAGTTTATCCAGCCATTTGGCTGTTTGTTAGCCCTTGATGAGAAAACATTTAAGGTCATAGCATTCAGCGAGAATGCCCCCGAAATGCTGACCATGGTTAGCCATGCTGTTCCAAGTGTGGGTGAGCTTCCAGCTCTTGGCATTGGGACTGATATCAGAACGATCTTCACTGGTCCTAGTGCAGCTGCATTGCAGAAGGCCTTGGGGTTCCGAGAGGTTTCTCTGTTAAATCCGGTCCTCGTTCACTGCAAAACTTCTGGGAAGCCATTTTATGCAATTGTTCATAGGGTTACAGGTAGCTTAATCATTGATTTCGAGCCTGTGAAGCCCTATGAAGTACCCATGACTGCTGCAGGGGCCCTGCAGTCGTATAAACTTGCAGCCAAAGCCATTACTCGCTTGCAGGCCTTGCCCAGCGGCAGTATGGAAAGACTTTGTGACACTATGGTTCAGGAGGTTTTCGAACTCACGGGTTATGACAGGGTGATGACGTATAAGTTTCACGATGATGATCATGGAGAGGTGGTGGCCGAGATCACGAAGCCTGGCCTCGATCCTTACCTTGGTTTACACTATCCTGCTACGGATATCCCACAGGCTGCACGCTTTTTGTTCATGAAGAATAAGGTCCGAATGATTTGTGATTGCCGAGCGAAACATGTGAAGGTAGTCCAAGATGAGAAGCTTCCATTTGATTTAACATTGTGCGGCTCTACCCTTAGGGCTCCTCACTACTGCCATCTACAGTATATGGAGAACATGAGTTCAATTGCATCCCTTGTAATGGCAGTTGTGGTCAATGACGGGGACGAAGAGGGAGAAAGCTCTGATTCGACACAATCTCAAAAGAGAAAAAGGCTTTGGGGCCTGGTGGTTTGCCACAACACCACCCCAAGGTTTGTTCCCTTCCCTCTGAGGTATGCATGTGAATTTCTTGCACAAGTCTTTGCCATACACGTCAACAAGGAACTGGAATTGGAAAGTCAGATTCTTGAGAAAAATATCCTGCGTACTCAGACTCTCTTGTGTGATATGCTGATGCGAGATGCTCCCTTAGGTATCGTGTCACAGAGTCCCAATATTATGGATCTTGTCAAATGTGATGCTGCTGCTTTGCTCTATAAGAATAAGATACATCGACTTGGAATGACCCCAAGCGACTTTCAGCTGCACGATATTGTCTCGTGGCTTTCTGAGTATCATACGGATTCCACAGGTTTGAGTACAGACAGCATGTATGATGCTGGTTTCCCTGGGGCTCTTGCTCTTGGTGATGCAGTGTGTGGTATGGCAGCTGTTAGAATATCTGATAAGGACTGGCTGTTCTGGTTTAGGTCACACACTGCTGCTGAAGTTAGATGGGGTGGAGCAAAGCATGAACCTGGTGAAAAGGATGATGGCAGGAAAATGCATCCTAGGTCATCATTCAAAGCATTCCTGGAAGTTGTCAAGACTAGGAGTATACCATGGAAGGACTATGAAATGGACGCAATCCATTCTTTGCAGCTTATACTAAGAAATGCATCCAAGGATGCTGATGCCATGGATTCAAATACCAATACTATCCACACGAAGCTTAACGATCTTAAGATTGATGGGTTGCAGGAGCTAGAAGCAGTGACTGCTGAAATGGTCCGCTTGATTGAAACAGCTTCAGTTCCTATCTTCGCAGTTGATGTTGATGGGCAGCTTAATGGCTGGAACACAAAAATTGCTGAATTAACCGGTCTTCCTGTTGATGAAGCAATTGGGAATCATTTGCTCACACTCGTGGAGGATTCCTCAGTTGATACAGTGAGTAAAATGTTGGAATTAGCATTGCAAGGGAAAGAGGAAAGAAATGTAGAGTTCGAAATAAAAACACATGGGCTGTCAGGAGATTCTAGTCCAATCAGCTTAATTGTGAATGCATGTGCAAGCAGGGATGTTGGAGATAGTGTTGTGGGTGTATGTTTTATTGCTCAGGATATAACAGGACAAAAAAATATTATGGACAAATTCACCCGGATTGAAGGTGACTATAGAGCTATTATCCAAAATCCTCACCCATTGATCCCACCAATATTTGGCACTGATCAATTCGGCTGGTGTTCTGAGTGGAACTCGGCAATGACAAAGTTAACTGGGTGGCGGCGTGATGATGTTATTGATAAAATGCTATTAGGGGAGGTTTTCGGGACACAGGGAGCTTGCTGCCGTTTCAAGAATCAAGAAGCTTTTGTAAATTTTGGAGTTGTACTAAACAATGCTATGACTGGTCAAGAGTGTGAGAAGATATCTTTTGGTTTCTTTGCACGTAATGGGAAATACGTAGAGTGCTTACTTTGTGTGAGCAAAAAGTTGGATAGAGAGGGTGCAGTCACGGGACTGTTTTGTTTCCTGCAGCTTGCAAGCCATGAGCTGCAGCAAGCTCTTCATGTTCAACGATTATCAGAACAAACTGCATTGAAGAGGTTGAAAGTATTAGCTTACATAAGGAGGCAGATTAGGAACCCTCTTTCTGGAATTATATTCTCTCGGAAAATGCTAGAGGGGACTAACTTGGGCGAAGAGCAGAAAAATATACTGCGTACTAGTTCCCAGTGTCAGCGTCAGCTCAACAAAATTCTTGATGATACAGATCTTGATAGCATCATTGATGGTTATTTGGATCTGGAGATGCTCGAGTTCAAGCTGCACGAAGTATTGGTAGCATCTATTAGTCAAATCATGATGAAGAGCAATGGAAAGAATATAATGATTGTGAATGACATGGTTGAAGATCTTCTCAATGAAACTTTATACGGAGATAGTCCGAGGCTTCAACAGGTCTTAGCTAACTTTTTGTTGGTATCTGTGAATTCTACACCAAGTGGTGGTCAGCTTAGTATTTCAGGCAGGTTAACAAAAGATCGCATAGGAGAATCTGTTCAGCTTGCTCTCTTGGAATTCAGGATAAGCCACACAGGGGGAGGAGTGCCAGAAGAATTGCTAAGCCAAATGTTCGGTACTGAGGCCGAAGCATCTGAAGAAGGAATCAGCTTACTCATCAGCAGAAAGCTGGTCAAGCTGATGAATGGGGAAGTTCAGTACCTAAGAGAGGCCGGGCGATCAACTTTCATTATATCCGTTGAACTTGCAGTGGCTACCAAGTCAAGCTGA
Protein:  
MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGPSAAALQKALGFREVSLLNPVLVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDAAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSMYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNASKDADAMDSNTNTIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGLSGDSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQGACCRFKNQEAFVNFGVVLNNAMTGQECEKISFGFFARNGKYVECLLCVSKKLDREGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS